https://shreyarajeshrao.r-universe.devRecent package updates in shreyarajeshraoR-universehttps://github.com/shreyarajeshrao.pnghttps://shreyarajeshrao.r-universe.devThu, 29 Oct 2026 02:36:37 GMTshreya.rajeshrao@sydney.edu.au (Shreya Rao)Cell type labels in spatial single-cell data are uncertain, particularly between closely related subtypes. fuzzyCell estimates a per-cell classification confidence by bootstrapping (multinomial resampling of each cell's counts followed by re-classification) and uses the resulting confidences as soft cell type weights. The weights are propagated through downstream analyses: cell type proportions, co-localisation (spicyR's L-function, and Statial's Kontextual test for relative co-localisation) and niche identification (lisaClust), each compared to the same analysis using hard labels. Cell types are organised with a user-supplied hierarchy of lineages, groups and subtypes. Helpers for testing against sample-level outcomes and for plotting are included.https://github.com/r-universe/biocstaging/actions/runs/40856093905Thu, 29 Oct 2026 02:36:37 GMTfuzzyCell0.99.1successhttps://biocstaging.r-universe.devhttps://github.com/BiocStaging/fuzzyCellfuzzyCell.qmdfuzzyCell.htmlConfidence-weighted spatial analysis with fuzzyCell2026-10-26 00:11:262026-10-29 02:24:40